Package index
-
all.models - Models for predicting clinical and molecular features
-
estimate.features() - Predict clinical and molecular features
-
estimate.subtypes() - Predict methylation subtype
-
example.data - Example CpG methylation dataset
-
example.data.gene.methy - Example gene methylation dataset
-
gene.methylation() - Gene-level methylation
-
gene.promoter.cpgi - CpG islands in the gene promoter region
-
subtype.model.pamr - PAMR model for predicting methylation subtype
-
subtype.model.rf - Random Forest model for predicting methylation subtype
-
validate.gene.methy.data() - Validate input data for gene.methylation()
-
validate.subtype.model.cpgs() - Validate input data for estimate.subtypes()