Package index
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all.models - Models for predicting clinical and molecular features
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estimate.features() - Predict clinical and molecular features
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estimate.subtypes() - Predict methylation subtype
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example.data - Example CpG methylation dataset
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example.data.gene.methy - Example gene methylation dataset
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gene.methylation() - Gene-level methylation
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gene.promoter.cpgi - CpG islands in the gene promoter region
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subtype.model - Model for predicting methylation subtype
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validate.gene.methy.data() - Validate input data for gene.methylation()
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validate.subtype.model.cpgs() - Validate input data for estimate.subtypes()