Outputs

Output Description
.bcf Binary VCF output format from DELLY with somatic structural variants if found.
.bcf.csi CSI-format index for BCF files from DELLY.
.vcf.gz zipped VCF output format from Manta with somatic structural variants if found.
.vcf.gz.tbi TBI-format index for zipped VCF files from Manta.
report.html, timeline.html and trace.txt A Nextflow report, timeline and trace files.
*.log.command.* Process and sample specific logging files created by nextflow.
*.sha512 Generates SHA-512 hash to validate file integrity.