References

Vasimuddin Md, Sanchit Misra, Heng Li, Srinivas Aluru. Efficient Architecture-Aware Acceleration of BWA-MEM for Multicore Systems. IEEE Parallel and Distributed Processing Symposium (IPDPS), 2019.

Daehwan Kim, Ben Langmead, Steven L Salzberg. HISAT: a fast spliced aligner with low memory requirements. Nature Methods, 2015