Directionality of QC metrics
sign.correction.RdDirectionality of QC metrics
Usage
data(sign.correction)Format
A data frame containing the following columns: Metric, Sign
- Metric
Quality control metrics, corresponding to the metrics in
example.qc.dataframe- Sign
Directionality of each metric; positive (pos) means a higher metric is better, negative (neg) means a lower metric is better
Examples
# \donttest{
data(sign.correction)
data(example.qc.dataframe)
correct.zscore.signs(
zscores = example.qc.dataframe,
signs.data = sign.correction,
metric.col.name = 'Metric',
signs.col.name = 'Sign',
);
#> UniquelyMapped.Percent.Input Unmapped.Percent.Input
#> CPCG0100 0 -10.97
#> CPCG0183 0 -8.75
#> CPCG0184 0 -11.24
#> CPCG0191 0 -13.95
#> CPCG0192 0 -13.01
#> CPCG0196 0 -13.58
#> CPCG0208 0 -8.89
#> CPCG0235 0 -9.17
#> CPCG0236 0 -7.95
#> CPCG0241 0 -9.17
#> CPCG0246 0 -7.79
#> CPCG0248 0 -14.97
#> CPCG0249 0 -9.57
#> CPCG0250 0 -10.83
#> CPCG0251 0 -19.31
#> CPCG0255 0 -14.22
#> CPCG0256 0 -9.17
#> CPCG0258 0 -13.16
#> CPCG0259 0 -16.01
#> CPCG0263 0 -16.19
#> CPCG0266 0 -17.72
#> CPCG0267 0 -12.89
#> CPCG0269 0 -12.04
#> CPCG0271 0 -14.16
#> CPCG0324 0 -21.56
#> CPCG0331 0 -11.91
#> CPCG0333 0 -7.03
#> CPCG0334 0 -13.76
#> CPCG0335 0 -16.63
#> CPCG0336 0 -5.60
#> CPCG0339 0 -13.33
#> CPCG0340 0 -11.87
#> CPCG0341 0 -9.99
#> CPCG0342 0 -9.98
#> CPCG0344 0 -8.79
#> CPCG0345 0 -10.99
#> CPCG0346 0 -12.84
#> CPCG0348 0 -9.47
#> CPCG0361 0 -16.76
#> CPCG0365 0 -10.22
#> CPCG0366 0 -13.28
#> CPCG0375 0 -24.82
#> CPCG0382 0 -28.16
#> CPCG0388 0 -18.28
#> CPCG0392 0 -7.96
#> CPCG0395 0 -10.81
#> CPCG0396 0 -10.10
#> CPCG0397 0 -13.13
#> CPCG0398 0 -7.34
#> CPCG0401 0 -19.69
#> CPCG0402 0 -7.36
#> CPCG0404 0 -12.72
#> CPCG0406 0 -7.87
#> CPCG0407 0 -11.14
#> CPCG0408 0 -12.04
#> CPCG0410 0 -10.34
#> CPCG0411 0 -9.72
#> CPCG0412 0 -11.43
#> CPCG0413 0 -10.63
#> CPCG0414 0 -8.63
#> CPCG0416 0 -6.88
#> CPCG0418 0 -15.39
#> CPCG0423 0 -11.43
#> CPCG0426 0 -12.54
#> CPCG0428 0 -12.74
#> CPCG0432 0 -8.05
#> CPCG0434 0 -16.03
#> CPCG0437 0 -16.73
#> CPCG0439 0 -3.70
#> CPCG0445 0 -3.60
#> CPCG0448 0 -10.44
#> CPCG0450 0 -18.89
#> CPCG0454 0 -12.70
#> CPCG0455 0 -8.62
#> CPCG0456 0 -9.70
#> CPCG0457 0 -9.94
#> CPCG0458 0 -11.42
#> CPCG0459 0 -12.40
#> CPCG0462 0 -12.91
#> CPCG0463 0 -11.45
#> CPCG0464 0 -11.78
#> CPCG0465 0 -13.42
#> CPCG0466 0 -7.35
#> CPCG0467 0 -8.63
#> CPCG0468 0 -16.31
#> CPCG0470 0 -10.16
#> CPCG0471 0 -9.60
#> CPCG0472 0 -6.39
#> CPCG0474 0 -9.40
#> CPCG0482 0 -6.94
#> CPCG0483 0 -7.23
#> CPCG0486 0 -16.52
#> CPCG0487 0 -9.19
#> CPCG0489 0 -6.97
#> CPCG0490 0 -9.98
#> CPCG0496 0 -13.79
#> CPCG0498 0 -19.07
#> CPCG0499 0 -10.80
#> CPCG0500 0 -11.28
#> CPCG0502 0 -11.61
#> MultiMapped.Percent.Input UniquelyMapped.Percent.IP
#> CPCG0100 0 0
#> CPCG0183 0 0
#> CPCG0184 0 0
#> CPCG0191 0 0
#> CPCG0192 0 0
#> CPCG0196 0 0
#> CPCG0208 0 0
#> CPCG0235 0 0
#> CPCG0236 0 0
#> CPCG0241 0 0
#> CPCG0246 0 0
#> CPCG0248 0 0
#> CPCG0249 0 0
#> CPCG0250 0 0
#> CPCG0251 0 0
#> CPCG0255 0 0
#> CPCG0256 0 0
#> CPCG0258 0 0
#> CPCG0259 0 0
#> CPCG0263 0 0
#> CPCG0266 0 0
#> CPCG0267 0 0
#> CPCG0269 0 0
#> CPCG0271 0 0
#> CPCG0324 0 0
#> CPCG0331 0 0
#> CPCG0333 0 0
#> CPCG0334 0 0
#> CPCG0335 0 0
#> CPCG0336 0 0
#> CPCG0339 0 0
#> CPCG0340 0 0
#> CPCG0341 0 0
#> CPCG0342 0 0
#> CPCG0344 0 0
#> CPCG0345 0 0
#> CPCG0346 0 0
#> CPCG0348 0 0
#> CPCG0361 0 0
#> CPCG0365 0 0
#> CPCG0366 0 0
#> CPCG0375 0 0
#> CPCG0382 0 0
#> CPCG0388 0 0
#> CPCG0392 0 0
#> CPCG0395 0 0
#> CPCG0396 0 0
#> CPCG0397 0 0
#> CPCG0398 0 0
#> CPCG0401 0 0
#> CPCG0402 0 0
#> CPCG0404 0 0
#> CPCG0406 0 0
#> CPCG0407 0 0
#> CPCG0408 0 0
#> CPCG0410 0 0
#> CPCG0411 0 0
#> CPCG0412 0 0
#> CPCG0413 0 0
#> CPCG0414 0 0
#> CPCG0416 0 0
#> CPCG0418 0 0
#> CPCG0423 0 0
#> CPCG0426 0 0
#> CPCG0428 0 0
#> CPCG0432 0 0
#> CPCG0434 0 0
#> CPCG0437 0 0
#> CPCG0439 0 0
#> CPCG0445 0 0
#> CPCG0448 0 0
#> CPCG0450 0 0
#> CPCG0454 0 0
#> CPCG0455 0 0
#> CPCG0456 0 0
#> CPCG0457 0 0
#> CPCG0458 0 0
#> CPCG0459 0 0
#> CPCG0462 0 0
#> CPCG0463 0 0
#> CPCG0464 0 0
#> CPCG0465 0 0
#> CPCG0466 0 0
#> CPCG0467 0 0
#> CPCG0468 0 0
#> CPCG0470 0 0
#> CPCG0471 0 0
#> CPCG0472 0 0
#> CPCG0474 0 0
#> CPCG0482 0 0
#> CPCG0483 0 0
#> CPCG0486 0 0
#> CPCG0487 0 0
#> CPCG0489 0 0
#> CPCG0490 0 0
#> CPCG0496 0 0
#> CPCG0498 0 0
#> CPCG0499 0 0
#> CPCG0500 0 0
#> CPCG0502 0 0
#> Unmapped.Percent.IP MultiMapped.Percent.IP UniquelyMapped.Count.Input
#> CPCG0100 -18.94 0 0
#> CPCG0183 -12.32 0 0
#> CPCG0184 -15.82 0 0
#> CPCG0191 -10.66 0 0
#> CPCG0192 -7.97 0 0
#> CPCG0196 -20.30 0 0
#> CPCG0208 -44.58 0 0
#> CPCG0235 -34.16 0 0
#> CPCG0236 -12.19 0 0
#> CPCG0241 -3.76 0 0
#> CPCG0246 -18.11 0 0
#> CPCG0248 -12.61 0 0
#> CPCG0249 -11.19 0 0
#> CPCG0250 -9.02 0 0
#> CPCG0251 -12.75 0 0
#> CPCG0255 -11.12 0 0
#> CPCG0256 -11.03 0 0
#> CPCG0258 -11.60 0 0
#> CPCG0259 -10.58 0 0
#> CPCG0263 -11.63 0 0
#> CPCG0266 -12.77 0 0
#> CPCG0267 -3.19 0 0
#> CPCG0269 -9.22 0 0
#> CPCG0271 -16.72 0 0
#> CPCG0324 -6.90 0 0
#> CPCG0331 -10.57 0 0
#> CPCG0333 -10.78 0 0
#> CPCG0334 -10.50 0 0
#> CPCG0335 -18.63 0 0
#> CPCG0336 -12.97 0 0
#> CPCG0339 -12.74 0 0
#> CPCG0340 -10.84 0 0
#> CPCG0341 -23.24 0 0
#> CPCG0342 -14.82 0 0
#> CPCG0344 -6.83 0 0
#> CPCG0345 -27.49 0 0
#> CPCG0346 -13.22 0 0
#> CPCG0348 -21.42 0 0
#> CPCG0361 -21.73 0 0
#> CPCG0365 -13.92 0 0
#> CPCG0366 -11.14 0 0
#> CPCG0375 -67.17 0 0
#> CPCG0382 -35.19 0 0
#> CPCG0388 -16.62 0 0
#> CPCG0392 -7.50 0 0
#> CPCG0395 -17.07 0 0
#> CPCG0396 -20.87 0 0
#> CPCG0397 -24.57 0 0
#> CPCG0398 -8.80 0 0
#> CPCG0401 -20.86 0 0
#> CPCG0402 -29.76 0 0
#> CPCG0404 -32.24 0 0
#> CPCG0406 -31.09 0 0
#> CPCG0407 -42.12 0 0
#> CPCG0408 -20.41 0 0
#> CPCG0410 -16.97 0 0
#> CPCG0411 -15.94 0 0
#> CPCG0412 -18.70 0 0
#> CPCG0413 -9.51 0 0
#> CPCG0414 -12.53 0 0
#> CPCG0416 -22.43 0 0
#> CPCG0418 -13.23 0 0
#> CPCG0423 -15.12 0 0
#> CPCG0426 -14.97 0 0
#> CPCG0428 -31.23 0 0
#> CPCG0432 -11.46 0 0
#> CPCG0434 -15.61 0 0
#> CPCG0437 -20.11 0 0
#> CPCG0439 -15.14 0 0
#> CPCG0445 -10.85 0 0
#> CPCG0448 -23.40 0 0
#> CPCG0450 -29.93 0 0
#> CPCG0454 -6.99 0 0
#> CPCG0455 -15.54 0 0
#> CPCG0456 -27.34 0 0
#> CPCG0457 -16.62 0 0
#> CPCG0458 -14.90 0 0
#> CPCG0459 -22.49 0 0
#> CPCG0462 -18.03 0 0
#> CPCG0463 -10.76 0 0
#> CPCG0464 -25.31 0 0
#> CPCG0465 -10.87 0 0
#> CPCG0466 -17.05 0 0
#> CPCG0467 -21.31 0 0
#> CPCG0468 -40.09 0 0
#> CPCG0470 -17.37 0 0
#> CPCG0471 -19.59 0 0
#> CPCG0472 -10.32 0 0
#> CPCG0474 -22.06 0 0
#> CPCG0482 -16.90 0 0
#> CPCG0483 -10.67 0 0
#> CPCG0486 -53.63 0 0
#> CPCG0487 -9.65 0 0
#> CPCG0489 -8.74 0 0
#> CPCG0490 -8.25 0 0
#> CPCG0496 -41.35 0 0
#> CPCG0498 -57.21 0 0
#> CPCG0499 -19.34 0 0
#> CPCG0500 -16.22 0 0
#> CPCG0502 -39.44 0 0
#> Unmapped.Count.Input MultiMapped.Count.Input UniquelyMapped.Count.IP
#> CPCG0100 -3026043 0 0
#> CPCG0183 -2729165 0 0
#> CPCG0184 -5220018 0 0
#> CPCG0191 -8598400 0 0
#> CPCG0192 -7888213 0 0
#> CPCG0196 -6200466 0 0
#> CPCG0208 -3810796 0 0
#> CPCG0235 -3298688 0 0
#> CPCG0236 -4684720 0 0
#> CPCG0241 -4403483 0 0
#> CPCG0246 -2626558 0 0
#> CPCG0248 -6898898 0 0
#> CPCG0249 -4035815 0 0
#> CPCG0250 -4344095 0 0
#> CPCG0251 -10377110 0 0
#> CPCG0255 -7686642 0 0
#> CPCG0256 -8552546 0 0
#> CPCG0258 -7102538 0 0
#> CPCG0259 -11132724 0 0
#> CPCG0263 -9440860 0 0
#> CPCG0266 -13499016 0 0
#> CPCG0267 -2678362 0 0
#> CPCG0269 -5543715 0 0
#> CPCG0271 -7784790 0 0
#> CPCG0324 -10255772 0 0
#> CPCG0331 -5783771 0 0
#> CPCG0333 -3463384 0 0
#> CPCG0334 -13864079 0 0
#> CPCG0335 -12852969 0 0
#> CPCG0336 -1853774 0 0
#> CPCG0339 -9820942 0 0
#> CPCG0340 -10957222 0 0
#> CPCG0341 -5071911 0 0
#> CPCG0342 -3385408 0 0
#> CPCG0344 -4991014 0 0
#> CPCG0345 -6545937 0 0
#> CPCG0346 -6114070 0 0
#> CPCG0348 -3316553 0 0
#> CPCG0361 -6086746 0 0
#> CPCG0365 -3254521 0 0
#> CPCG0366 -5116243 0 0
#> CPCG0375 -18587604 0 0
#> CPCG0382 -19258017 0 0
#> CPCG0388 -6638939 0 0
#> CPCG0392 -2850281 0 0
#> CPCG0395 -6084252 0 0
#> CPCG0396 -5386334 0 0
#> CPCG0397 -6565068 0 0
#> CPCG0398 -5298966 0 0
#> CPCG0401 -12044045 0 0
#> CPCG0402 -4196273 0 0
#> CPCG0404 -7377695 0 0
#> CPCG0406 -3555363 0 0
#> CPCG0407 -5674325 0 0
#> CPCG0408 -7164887 0 0
#> CPCG0410 -7199458 0 0
#> CPCG0411 -2980991 0 0
#> CPCG0412 -12738581 0 0
#> CPCG0413 -5809013 0 0
#> CPCG0414 -3413672 0 0
#> CPCG0416 -2722570 0 0
#> CPCG0418 -18907355 0 0
#> CPCG0423 -2948884 0 0
#> CPCG0426 -5038562 0 0
#> CPCG0428 -6715287 0 0
#> CPCG0432 -2887326 0 0
#> CPCG0434 -8322390 0 0
#> CPCG0437 -7930468 0 0
#> CPCG0439 -1402783 0 0
#> CPCG0445 -2774736 0 0
#> CPCG0448 -4068130 0 0
#> CPCG0450 -4896286 0 0
#> CPCG0454 -7187742 0 0
#> CPCG0455 -6164681 0 0
#> CPCG0456 -4818962 0 0
#> CPCG0457 -4922542 0 0
#> CPCG0458 -9071680 0 0
#> CPCG0459 -5859878 0 0
#> CPCG0462 -6217578 0 0
#> CPCG0463 -5046029 0 0
#> CPCG0464 -4272868 0 0
#> CPCG0465 -4806123 0 0
#> CPCG0466 -3684542 0 0
#> CPCG0467 -3183768 0 0
#> CPCG0468 -6176866 0 0
#> CPCG0470 -6537530 0 0
#> CPCG0471 -5740690 0 0
#> CPCG0472 -1913214 0 0
#> CPCG0474 -6427914 0 0
#> CPCG0482 -4714278 0 0
#> CPCG0483 -3706891 0 0
#> CPCG0486 -18689964 0 0
#> CPCG0487 -3960683 0 0
#> CPCG0489 -3303723 0 0
#> CPCG0490 -6313627 0 0
#> CPCG0496 -11310138 0 0
#> CPCG0498 -11062089 0 0
#> CPCG0499 -3471567 0 0
#> CPCG0500 -2730156 0 0
#> CPCG0502 -12955467 0 0
#> Unmapped.Count.IP MultiMapped.Count.IP FailedToDetermine.Input
#> CPCG0100 -9427024 0 -0.1052
#> CPCG0183 -4902919 0 -0.1128
#> CPCG0184 -8820783 0 -0.1851
#> CPCG0191 -5552929 0 -0.1993
#> CPCG0192 -3883013 0 -0.3495
#> CPCG0196 -14978568 0 -0.1721
#> CPCG0208 -13023282 0 -0.0921
#> CPCG0235 -19325517 0 -0.3015
#> CPCG0236 -4886523 0 -0.1661
#> CPCG0241 -1594642 0 -0.1348
#> CPCG0246 -10864900 0 -0.0966
#> CPCG0248 -7384536 0 -0.1635
#> CPCG0249 -5855832 0 -0.1103
#> CPCG0250 -3886835 0 -0.1292
#> CPCG0251 -6165853 0 -0.1400
#> CPCG0255 -5139941 0 -0.1790
#> CPCG0256 -5316815 0 -0.9679
#> CPCG0258 -5707284 0 -0.2124
#> CPCG0259 -6574927 0 -0.1399
#> CPCG0263 -5374478 0 -0.8523
#> CPCG0266 -6923167 0 -0.3925
#> CPCG0267 -1643856 0 -0.1168
#> CPCG0269 -1639992 0 -0.0791
#> CPCG0271 -7773735 0 -0.1207
#> CPCG0324 -4340307 0 -0.1587
#> CPCG0331 -7222805 0 -0.3386
#> CPCG0333 -4757164 0 -0.1236
#> CPCG0334 -4925229 0 -0.2752
#> CPCG0335 -7567504 0 -0.2092
#> CPCG0336 -5363294 0 -0.0858
#> CPCG0339 -8106908 0 -0.2686
#> CPCG0340 -5249498 0 -0.2536
#> CPCG0341 -11712424 0 -0.1288
#> CPCG0342 -7447566 0 -0.0870
#> CPCG0344 -3224293 0 -0.1934
#> CPCG0345 -12944226 0 -0.1704
#> CPCG0346 -7925902 0 -0.1827
#> CPCG0348 -9695918 0 -0.1378
#> CPCG0361 -11845258 0 -0.1483
#> CPCG0365 -4633922 0 -0.1107
#> CPCG0366 -6962144 0 -0.1085
#> CPCG0375 -10328742 0 -0.0889
#> CPCG0382 -45438967 0 -0.1987
#> CPCG0388 -8956313 0 -0.1292
#> CPCG0392 -4909698 0 -0.1402
#> CPCG0395 -10803575 0 -0.2332
#> CPCG0396 -8590679 0 -0.2376
#> CPCG0397 -16421150 0 -0.1823
#> CPCG0398 -3231021 0 -0.2586
#> CPCG0401 -13242586 0 -0.1985
#> CPCG0402 -12487790 0 -0.1827
#> CPCG0404 -16103627 0 -0.3970
#> CPCG0406 -24630665 0 -0.1665
#> CPCG0407 -20092363 0 -0.1325
#> CPCG0408 -3559863 0 -0.2248
#> CPCG0410 -4135043 0 -0.3061
#> CPCG0411 -9601261 0 -0.1001
#> CPCG0412 -12804952 0 -0.2972
#> CPCG0413 -1961908 0 -0.2436
#> CPCG0414 -3810813 0 -0.1295
#> CPCG0416 -8708593 0 -0.1045
#> CPCG0418 -8701773 0 -0.2849
#> CPCG0423 -2291237 0 -0.1194
#> CPCG0426 -7305405 0 -0.1325
#> CPCG0428 -19785376 0 -0.2024
#> CPCG0432 -3576752 0 -0.1499
#> CPCG0434 -7597066 0 -0.2304
#> CPCG0437 -12653023 0 -0.1025
#> CPCG0439 -8360004 0 -0.1145
#> CPCG0445 -3427939 0 -0.1226
#> CPCG0448 -22683749 0 -0.1781
#> CPCG0450 -12992630 0 -0.1286
#> CPCG0454 -3798575 0 -0.2204
#> CPCG0455 -10305238 0 -0.3888
#> CPCG0456 -13453986 0 -0.3135
#> CPCG0457 -6942872 0 -0.1827
#> CPCG0458 -8285316 0 -0.2359
#> CPCG0459 -10991466 0 -0.1679
#> CPCG0462 -6848511 0 -0.1644
#> CPCG0463 -4258641 0 -0.1481
#> CPCG0464 -62135360 0 -0.1352
#> CPCG0465 -5060199 0 -0.1417
#> CPCG0466 -4408793 0 -0.2140
#> CPCG0467 -6584506 0 -0.1575
#> CPCG0468 -19005147 0 -0.1309
#> CPCG0470 -3356061 0 -0.1758
#> CPCG0471 -9968028 0 -0.1876
#> CPCG0472 -3782080 0 -0.1001
#> CPCG0474 -8924823 0 -0.1621
#> CPCG0482 -10372199 0 -0.1670
#> CPCG0483 -6714480 0 -0.1035
#> CPCG0486 -25727403 0 -0.4317
#> CPCG0487 -3758980 0 -0.1270
#> CPCG0489 -5286608 0 -0.1115
#> CPCG0490 -3946316 0 -0.2484
#> CPCG0496 -14806898 0 -0.3195
#> CPCG0498 -46047134 0 -0.1966
#> CPCG0499 -6004922 0 -0.1482
#> CPCG0500 -6095955 0 -0.1429
#> CPCG0502 -36465174 0 -0.3497
#> 1++,1--,2+-,2-+.Input 1+-,1-+,2++,2--.Input FailedToDetermine.IP
#> CPCG0100 -0.0561 0 -0.0859
#> CPCG0183 -0.0418 0 -0.1000
#> CPCG0184 -0.0379 0 -0.1049
#> CPCG0191 -0.0412 0 -0.1194
#> CPCG0192 -0.0405 0 -0.1522
#> CPCG0196 -0.0472 0 -0.0913
#> CPCG0208 -0.0323 0 -0.0549
#> CPCG0235 -0.0333 0 -0.2451
#> CPCG0236 -0.0392 0 -0.0968
#> CPCG0241 -0.0612 0 -0.1395
#> CPCG0246 -0.0246 0 -0.1609
#> CPCG0248 -0.0255 0 -0.1173
#> CPCG0249 -0.0355 0 -0.1275
#> CPCG0250 -0.0353 0 -0.0913
#> CPCG0251 -0.0421 0 -0.1944
#> CPCG0255 -0.0335 0 -0.1136
#> CPCG0256 -0.0068 0 -0.2167
#> CPCG0258 -0.0375 0 -0.1564
#> CPCG0259 -0.0404 0 -0.1125
#> CPCG0263 -0.0185 0 -0.1708
#> CPCG0266 -0.0307 0 -0.1919
#> CPCG0267 -0.0301 0 -0.1000
#> CPCG0269 -0.0471 0 -0.1215
#> CPCG0271 -0.0627 0 -0.0535
#> CPCG0324 -0.0279 0 -0.0839
#> CPCG0331 -0.0256 0 -0.1291
#> CPCG0333 -0.0335 0 -0.0811
#> CPCG0334 -0.0478 0 -0.0931
#> CPCG0335 -0.0390 0 -0.0622
#> CPCG0336 -0.0250 0 -0.0915
#> CPCG0339 -0.0290 0 -0.0949
#> CPCG0340 -0.0320 0 -0.0877
#> CPCG0341 -0.0289 0 -0.0672
#> CPCG0342 -0.0220 0 -0.0762
#> CPCG0344 -0.0276 0 -0.0995
#> CPCG0345 -0.0617 0 -0.0715
#> CPCG0346 -0.0239 0 -0.1103
#> CPCG0348 -0.0239 0 -0.0616
#> CPCG0361 -0.0418 0 -0.1133
#> CPCG0365 -0.0311 0 -0.0887
#> CPCG0366 -0.0266 0 -0.0560
#> CPCG0375 -0.1180 0 -0.0848
#> CPCG0382 -0.1071 0 -0.2411
#> CPCG0388 -0.0476 0 -0.0939
#> CPCG0392 -0.0484 0 -0.0940
#> CPCG0395 -0.0363 0 -0.0570
#> CPCG0396 -0.0397 0 -0.0731
#> CPCG0397 -0.0733 0 -0.0609
#> CPCG0398 -0.0547 0 -0.0771
#> CPCG0401 -0.1325 0 -0.0627
#> CPCG0402 -0.0718 0 -0.0759
#> CPCG0404 -0.0446 0 -0.1294
#> CPCG0406 -0.0300 0 -0.0828
#> CPCG0407 -0.0796 0 -0.0786
#> CPCG0408 -0.0794 0 -0.0653
#> CPCG0410 -0.0590 0 -0.0665
#> CPCG0411 -0.0480 0 -0.0655
#> CPCG0412 -0.0594 0 -0.1262
#> CPCG0413 -0.0698 0 -0.0629
#> CPCG0414 -0.0567 0 -0.0789
#> CPCG0416 -0.0523 0 -0.0591
#> CPCG0418 -0.0671 0 -0.1117
#> CPCG0423 -0.0843 0 -0.1098
#> CPCG0426 -0.0936 0 -0.0745
#> CPCG0428 -0.0905 0 -0.0659
#> CPCG0432 -0.0337 0 -0.0993
#> CPCG0434 -0.0277 0 -0.0898
#> CPCG0437 -0.0275 0 -0.1018
#> CPCG0439 -0.0204 0 -0.1177
#> CPCG0445 -0.0258 0 -0.0711
#> CPCG0448 -0.0693 0 -0.1511
#> CPCG0450 -0.0830 0 -0.0676
#> CPCG0454 -0.0966 0 -0.0467
#> CPCG0455 -0.0549 0 -0.0858
#> CPCG0456 -0.0409 0 -0.1211
#> CPCG0457 -0.0394 0 -0.0726
#> CPCG0458 -0.0397 0 -0.0950
#> CPCG0459 -0.0932 0 -0.0866
#> CPCG0462 -0.0419 0 -0.0855
#> CPCG0463 -0.0527 0 -0.0756
#> CPCG0464 -0.0649 0 -0.7026
#> CPCG0465 -0.0597 0 -0.0983
#> CPCG0466 -0.0579 0 -0.0704
#> CPCG0467 -0.0449 0 -0.0856
#> CPCG0468 -0.1059 0 -0.0640
#> CPCG0470 -0.0756 0 -0.0683
#> CPCG0471 -0.0823 0 -0.0803
#> CPCG0472 -0.0708 0 -0.0819
#> CPCG0474 -0.0736 0 -0.0798
#> CPCG0482 -0.0709 0 -0.0615
#> CPCG0483 -0.0780 0 -0.0856
#> CPCG0486 -0.0651 0 -0.0607
#> CPCG0487 -0.0745 0 -0.0671
#> CPCG0489 -0.0735 0 -0.0610
#> CPCG0490 -0.0618 0 -0.0940
#> CPCG0496 -0.0888 0 -0.0701
#> CPCG0498 -0.0951 0 -0.0811
#> CPCG0499 -0.0583 0 -0.0914
#> CPCG0500 -0.0998 0 -0.0807
#> CPCG0502 -0.0740 0 -0.1411
#> 1++,1--,2+-,2-+.IP 1+-,1-+,2++,2--.IP Adapter1.percent.Input
#> CPCG0100 -0.0876 0 -37.291887
#> CPCG0183 -0.0943 0 -22.184757
#> CPCG0184 -0.0673 0 -33.412928
#> CPCG0191 -0.0640 0 -42.738191
#> CPCG0192 -0.0764 0 -38.907058
#> CPCG0196 -0.0692 0 -37.056743
#> CPCG0208 -0.0516 0 -14.981834
#> CPCG0235 -0.0847 0 -26.678953
#> CPCG0236 -0.0786 0 -23.909840
#> CPCG0241 -0.0704 0 -16.295551
#> CPCG0246 -0.0745 0 -15.162484
#> CPCG0248 -0.0540 0 -38.927940
#> CPCG0249 -0.0626 0 -19.813259
#> CPCG0250 -0.0439 0 -20.457998
#> CPCG0251 -0.0598 0 -45.208833
#> CPCG0255 -0.0798 0 -31.618656
#> CPCG0256 -0.0784 0 -35.817546
#> CPCG0258 -0.0434 0 -36.522250
#> CPCG0259 -0.0946 0 -44.645867
#> CPCG0263 -0.0697 0 -64.195131
#> CPCG0266 -0.0429 0 -68.192308
#> CPCG0267 -0.0948 0 -23.347952
#> CPCG0269 -0.0443 0 -34.397108
#> CPCG0271 -0.1376 0 -41.564584
#> CPCG0324 -0.0719 0 -47.713268
#> CPCG0331 -0.0568 0 -41.297238
#> CPCG0333 -0.0474 0 -7.149931
#> CPCG0334 -0.0883 0 -29.594377
#> CPCG0335 -0.0701 0 -39.357352
#> CPCG0336 -0.0646 0 -6.120804
#> CPCG0339 -0.0792 0 -36.193720
#> CPCG0340 -0.0612 0 -18.317585
#> CPCG0341 -0.0994 0 -18.580506
#> CPCG0342 -0.0754 0 -18.624239
#> CPCG0344 -0.0672 0 -13.922999
#> CPCG0345 -0.1078 0 -18.271287
#> CPCG0346 -0.0865 0 -28.645888
#> CPCG0348 -0.0996 0 -19.102490
#> CPCG0361 -0.0780 0 -38.112827
#> CPCG0365 -0.0813 0 -42.398689
#> CPCG0366 -0.0854 0 -38.817281
#> CPCG0375 -0.0601 0 -64.956705
#> CPCG0382 -0.1177 0 -91.329770
#> CPCG0388 -0.1073 0 -59.312043
#> CPCG0392 -0.0636 0 -14.323540
#> CPCG0395 -0.0727 0 -35.173698
#> CPCG0396 -0.1614 0 -50.830917
#> CPCG0397 -0.2265 0 -44.273855
#> CPCG0398 -0.0695 0 -14.674230
#> CPCG0401 -0.1103 0 -74.258779
#> CPCG0402 -0.0955 0 -19.308138
#> CPCG0404 -0.1020 0 -42.661748
#> CPCG0406 -0.1019 0 -39.970432
#> CPCG0407 -0.0820 0 -33.972906
#> CPCG0408 -0.0525 0 -40.287021
#> CPCG0410 -0.0737 0 -27.399757
#> CPCG0411 -0.0685 0 -28.648632
#> CPCG0412 -0.0963 0 -34.303554
#> CPCG0413 -0.0770 0 -33.757916
#> CPCG0414 -0.0634 0 -20.827068
#> CPCG0416 -0.0618 0 -10.276993
#> CPCG0418 -0.1224 0 -40.200003
#> CPCG0423 -0.0646 0 -45.479151
#> CPCG0426 -0.0799 0 -39.192584
#> CPCG0428 -0.0960 0 -43.796382
#> CPCG0432 -0.0991 0 -41.763443
#> CPCG0434 -0.0578 0 -43.019853
#> CPCG0437 -0.1495 0 -79.794129
#> CPCG0439 -0.1050 0 -36.587754
#> CPCG0445 -0.0795 0 -34.527427
#> CPCG0448 -0.0694 0 -42.772668
#> CPCG0450 -0.0810 0 -64.028339
#> CPCG0454 -0.1248 0 -48.663377
#> CPCG0455 -0.1328 0 -25.915355
#> CPCG0456 -0.0889 0 -44.185601
#> CPCG0457 -0.0733 0 -33.048492
#> CPCG0458 -0.0646 0 -33.104059
#> CPCG0459 -0.1184 0 -33.202338
#> CPCG0462 -0.0814 0 -28.128404
#> CPCG0463 -0.0948 0 -46.295691
#> CPCG0464 -0.0062 0 -24.245351
#> CPCG0465 -0.0741 0 -37.591155
#> CPCG0466 -0.0776 0 -26.270483
#> CPCG0467 -0.1008 0 -31.375058
#> CPCG0468 -0.1093 0 -49.202564
#> CPCG0470 -0.0708 0 -24.509455
#> CPCG0471 -0.1904 0 -21.006480
#> CPCG0472 -0.1047 0 -20.751934
#> CPCG0474 -0.1060 0 -14.908458
#> CPCG0482 -0.1458 0 -11.149254
#> CPCG0483 -0.1226 0 -10.215599
#> CPCG0486 -0.1019 0 -49.526205
#> CPCG0487 -0.1007 0 -22.778838
#> CPCG0489 -0.1760 0 -12.336993
#> CPCG0490 -0.1147 0 -38.067095
#> CPCG0496 -0.0987 0 -45.590272
#> CPCG0498 -0.1181 0 -67.260906
#> CPCG0499 -0.0784 0 -35.885694
#> CPCG0500 -0.1756 0 -35.719948
#> CPCG0502 -0.1277 0 -25.760083
#> Adapter2.percent.Input Adapter1.percent.IP Adapter2.percent.IP
#> CPCG0100 -37.136874 -11.174902 -12.122836
#> CPCG0183 -22.307535 -9.909489 -11.407825
#> CPCG0184 -33.278729 -17.675824 -18.629666
#> CPCG0191 -42.776918 -23.696300 -24.868946
#> CPCG0192 -38.964692 -17.103888 -18.347578
#> CPCG0196 -36.746282 -22.523467 -23.251104
#> CPCG0208 -15.574962 -5.683547 -6.822857
#> CPCG0235 -26.415385 -31.136742 -31.695940
#> CPCG0236 -24.030454 -23.768179 -24.847469
#> CPCG0241 -16.225018 -12.606873 -14.135614
#> CPCG0246 -15.409207 -21.695508 -22.925301
#> CPCG0248 -38.949904 -25.397291 -26.570860
#> CPCG0249 -19.361627 -29.007207 -29.884473
#> CPCG0250 -20.947702 -20.245271 -21.159525
#> CPCG0251 -45.217636 -24.280771 -25.379973
#> CPCG0255 -31.613307 -18.329533 -19.653208
#> CPCG0256 -36.479347 -27.228107 -28.125117
#> CPCG0258 -36.541145 -32.645635 -33.295146
#> CPCG0259 -44.217658 -25.978275 -26.788327
#> CPCG0263 -64.540940 -18.263765 -19.248851
#> CPCG0266 -68.558283 -33.940871 -34.462585
#> CPCG0267 -22.766386 -13.346812 -14.875429
#> CPCG0269 -32.972687 -16.863934 -17.998932
#> CPCG0271 -41.725521 -21.907838 -23.015498
#> CPCG0324 -46.282220 -13.037421 -14.181510
#> CPCG0331 -41.240221 -18.627844 -19.627335
#> CPCG0333 -7.846523 -25.282087 -26.048907
#> CPCG0334 -29.338018 -9.397045 -10.627430
#> CPCG0335 -38.578711 -18.973514 -19.895411
#> CPCG0336 -6.819812 -22.121852 -23.067914
#> CPCG0339 -35.749952 -23.390062 -24.297032
#> CPCG0340 -17.517540 -10.939210 -12.161523
#> CPCG0341 -17.767258 -29.077865 -29.891610
#> CPCG0342 -18.127733 -19.262717 -20.451408
#> CPCG0344 -14.082259 -13.903001 -15.297523
#> CPCG0345 -18.320229 -12.776493 -13.921312
#> CPCG0346 -28.388240 -17.157888 -18.412431
#> CPCG0348 -19.277259 -13.601232 -14.801086
#> CPCG0361 -37.677516 -13.117641 -14.233704
#> CPCG0365 -42.331733 -12.900420 -14.180548
#> CPCG0366 -38.794906 -14.127919 -15.234872
#> CPCG0375 -64.230710 -28.795111 -29.071027
#> CPCG0382 -90.652431 -18.171911 -19.073233
#> CPCG0388 -57.967882 -13.429295 -14.405527
#> CPCG0392 -14.727624 -16.523020 -17.768333
#> CPCG0395 -35.145744 -12.045061 -13.129949
#> CPCG0396 -50.628278 -18.756434 -19.694501
#> CPCG0397 -44.111748 -22.498236 -23.241020
#> CPCG0398 -15.277916 -16.686264 -17.896584
#> CPCG0401 -73.194491 -19.139710 -20.058503
#> CPCG0402 -19.409228 -26.837171 -27.379451
#> CPCG0404 -41.747260 -31.448751 -31.811247
#> CPCG0406 -40.380742 -22.246821 -23.066848
#> CPCG0407 -33.342433 -42.886800 -43.072279
#> CPCG0408 -39.643385 -37.898146 -38.294590
#> CPCG0410 -27.362266 -16.720492 -17.551816
#> CPCG0411 -28.461130 -22.780864 -23.410418
#> CPCG0412 -33.968646 -24.922657 -25.529451
#> CPCG0413 -33.613095 -14.343517 -15.309374
#> CPCG0414 -21.081644 -17.147480 -18.110793
#> CPCG0416 -11.146063 -4.041790 -5.436201
#> CPCG0418 -40.187433 -17.844402 -18.933481
#> CPCG0423 -44.897392 -15.178760 -16.234506
#> CPCG0426 -39.065255 -12.543108 -13.499304
#> CPCG0428 -43.373503 -44.612962 -44.884132
#> CPCG0432 -41.332788 -23.728876 -24.616128
#> CPCG0434 -42.561732 -20.297713 -21.108227
#> CPCG0437 -79.651980 -71.144021 -70.993539
#> CPCG0439 -37.601701 -23.701154 -24.543964
#> CPCG0445 -35.767684 -21.030149 -22.047250
#> CPCG0448 -42.649481 -21.088288 -21.838943
#> CPCG0450 -63.142557 -13.811865 -14.843089
#> CPCG0454 -48.682530 -10.214074 -11.321723
#> CPCG0455 -26.380328 -22.987258 -23.773566
#> CPCG0456 -44.415184 -29.593191 -30.166809
#> CPCG0457 -33.571529 -17.333728 -18.329371
#> CPCG0458 -31.782894 -33.086296 -33.667376
#> CPCG0459 -33.174803 -19.025390 -19.835199
#> CPCG0462 -27.639086 -37.933948 -38.459905
#> CPCG0463 -46.073672 -24.417071 -25.348660
#> CPCG0464 -24.310713 -23.738809 -24.655779
#> CPCG0465 -37.219520 -10.083859 -10.887035
#> CPCG0466 -26.953723 -10.429024 -11.571793
#> CPCG0467 -31.933021 -21.029184 -21.950687
#> CPCG0468 -48.992458 -21.913814 -22.327723
#> CPCG0470 -24.738190 -12.395495 -13.354478
#> CPCG0471 -21.224508 -16.100720 -16.872711
#> CPCG0472 -21.193844 -20.622444 -21.467346
#> CPCG0474 -15.762680 -4.880036 -6.256891
#> CPCG0482 -12.057440 -4.302381 -5.666246
#> CPCG0483 -11.210239 -3.466557 -5.096132
#> CPCG0486 -48.968184 -13.970544 -14.504363
#> CPCG0487 -23.551497 -3.666145 -5.186656
#> CPCG0489 -13.193531 -3.566037 -5.147007
#> CPCG0490 -38.266175 -18.087384 -19.110711
#> CPCG0496 -45.314319 -10.805439 -11.621435
#> CPCG0498 -66.708625 -24.891540 -25.447223
#> CPCG0499 -36.075958 -19.066297 -20.004480
#> CPCG0500 -36.024042 -23.349303 -24.243311
#> CPCG0502 -25.828581 -28.706643 -29.246178
#> PercentEK12.Input PercentEK12.IP Bulk.Rho Array.Rho
#> CPCG0100 -10.088863 -17.839394 0 0
#> CPCG0183 -6.695480 -11.116342 0 0
#> CPCG0184 -7.911547 -12.860912 0 0
#> CPCG0191 -4.845386 -10.486731 0 0
#> CPCG0192 -4.815169 -11.289284 0 0
#> CPCG0196 -8.992902 -15.514768 0 0
#> CPCG0208 -6.152142 -10.565970 0 0
#> CPCG0235 -28.701266 -39.321924 0 0
#> CPCG0236 -5.695811 -8.945575 0 0
#> CPCG0241 -5.128421 -18.861057 0 0
#> CPCG0246 -5.280670 -13.367860 0 0
#> CPCG0248 -4.008541 -7.550507 0 0
#> CPCG0249 -3.040076 -9.404564 0 0
#> CPCG0250 -4.744903 -9.443240 0 0
#> CPCG0251 -3.797547 -13.098490 0 0
#> CPCG0255 -6.203119 -17.358966 0 0
#> CPCG0256 -4.718917 -9.347434 0 0
#> CPCG0258 -7.362581 -12.004552 0 0
#> CPCG0259 -4.477300 -11.934818 0 0
#> CPCG0263 -7.012186 -14.919367 0 0
#> CPCG0266 -5.998071 -9.553133 0 0
#> CPCG0267 -2.838683 -10.291791 0 0
#> CPCG0269 -2.555470 -13.727060 0 0
#> CPCG0271 -6.413772 -17.231941 0 0
#> CPCG0324 -4.032150 -9.971026 0 0
#> CPCG0331 -4.691742 -6.658661 0 0
#> CPCG0333 -6.563245 -9.208769 0 0
#> CPCG0334 -4.982964 -11.332925 0 0
#> CPCG0335 -7.615142 -11.909363 0 0
#> CPCG0336 -5.599110 -11.006036 0 0
#> CPCG0339 -4.389485 -11.254718 0 0
#> CPCG0340 -4.829002 -8.909766 0 0
#> CPCG0341 -4.445542 -10.864485 0 0
#> CPCG0342 -4.121440 -9.303342 0 0
#> CPCG0344 -4.382474 -26.859001 0 0
#> CPCG0345 -4.905403 -12.671912 0 0
#> CPCG0346 -3.222237 -8.346713 0 0
#> CPCG0348 -4.231162 -10.291015 0 0
#> CPCG0361 -5.588823 -11.251065 0 0
#> CPCG0365 -6.618302 -9.263838 0 0
#> CPCG0366 -3.891462 -11.380212 0 0
#> CPCG0375 -11.716111 -52.517764 0 0
#> CPCG0382 -6.734687 -21.278396 0 0
#> CPCG0388 -7.574595 -10.522073 0 0
#> CPCG0392 -4.681804 -17.459177 0 0
#> CPCG0395 -7.244690 -20.183636 0 0
#> CPCG0396 -5.522598 -9.640935 0 0
#> CPCG0397 -6.256925 -11.864357 0 0
#> CPCG0398 -5.012822 -13.604075 0 0
#> CPCG0401 -5.004049 -11.776419 0 0
#> CPCG0402 -17.876610 -25.418043 0 0
#> CPCG0404 -17.118412 -24.025774 0 0
#> CPCG0406 -13.898323 -25.744577 0 0
#> CPCG0407 -14.410717 -24.617145 0 0
#> CPCG0408 -12.012829 -18.928049 0 0
#> CPCG0410 -8.052171 -16.146423 0 0
#> CPCG0411 -14.857343 -17.402948 0 0
#> CPCG0412 -12.266465 -16.022797 0 0
#> CPCG0413 -6.035377 -6.950813 0 0
#> CPCG0414 -10.547042 -11.224793 0 0
#> CPCG0416 -4.320764 -5.861827 0 0
#> CPCG0418 -4.580069 -10.545830 0 0
#> CPCG0423 -4.620329 -6.404900 0 0
#> CPCG0426 -5.823315 -9.176400 0 0
#> CPCG0428 -9.387842 -12.883252 0 0
#> CPCG0432 -3.038996 -6.537510 0 0
#> CPCG0434 -6.062428 -12.206438 0 0
#> CPCG0437 -4.514511 -6.773626 0 0
#> CPCG0439 -9.926056 -14.867242 0 0
#> CPCG0445 -8.465158 -14.046572 0 0
#> CPCG0448 -6.922537 -10.109694 0 0
#> CPCG0450 -5.858152 -9.598188 0 0
#> CPCG0454 -6.787904 -10.264188 0 0
#> CPCG0455 -6.831919 -11.183960 0 0
#> CPCG0456 -7.128239 -10.566258 0 0
#> CPCG0457 -7.797337 -12.134338 0 0
#> CPCG0458 -5.839689 -9.551117 0 0
#> CPCG0459 -6.672759 -14.502202 0 0
#> CPCG0462 -4.620054 -9.790407 0 0
#> CPCG0463 -5.429718 -8.661197 0 0
#> CPCG0464 -6.624523 -12.203003 0 0
#> CPCG0465 -8.793215 -12.818345 0 0
#> CPCG0466 -4.648526 -6.532091 0 0
#> CPCG0467 -7.701478 -11.112419 0 0
#> CPCG0468 -7.197239 -15.419644 0 0
#> CPCG0470 -8.876449 -13.931029 0 0
#> CPCG0471 -7.765065 -14.681928 0 0
#> CPCG0472 -6.288410 -7.368045 0 0
#> CPCG0474 -4.421077 -8.619733 0 0
#> CPCG0482 -3.711191 -6.197080 0 0
#> CPCG0483 -4.053743 -5.278377 0 0
#> CPCG0486 -6.753351 -14.584605 0 0
#> CPCG0487 -3.273947 -5.332279 0 0
#> CPCG0489 -3.516326 -7.448471 0 0
#> CPCG0490 -2.965347 -4.485696 0 0
#> CPCG0496 -4.757503 -9.988220 0 0
#> CPCG0498 -9.070381 -15.468428 0 0
#> CPCG0499 -9.576401 -15.667398 0 0
#> CPCG0500 -6.400262 -14.719005 0 0
#> CPCG0502 -10.213884 -12.884183 0 0
# }